Data Architect / Knowledge Engineer – Euro-bioimaging (ai4access)

EMBL (European Molecular Biology Lab)

Heidelberg, Germany
Base: grade 5-6, approx. 4,031 eurpmnth after tax;...
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Ontology-aligned data model design
Advanced python programming skills
Production-ready database management
** The European Molecular Biology Lab (EMBL) is seeking a Data Architect/Knowledge Engineer for the Euro-BioImaging project, focusing on developing an ontology-driven knowledge base to enhance scientific data access and usability. The role requires strong technical skills in database design, data pipelines, and API development, ideally suited for candidates with a background in data science or bioinformatics. **

Job Summary

  • The role involves designing a structured, ontology-aligned knowledge base to power the AI4Access Research Navigator for Euro-BioImaging.
  • Candidates will develop robust automated ETL workflows and APIs to integrate diverse imaging service data sources with high reliability.
  • EMBL offers a tax-free salary, 30 days of annual leave, comprehensive private medical insurance, and a flexible, inclusive international work culture.

Matching Summary

Match Score: 75

** The European Molecular Biology Lab (EMBL) is seeking a Data Architect/Knowledge Engineer for the Euro-BioImaging project, focusing on developing an ontology-driven knowledge base to enhance scientific data access and usability. The role requires strong technical skills in database design, data pipelines, and API development, ideally suited for candidates with a background in data science or bioinformatics. **

Salary

Base: Grade 5-6, approx. 4,031 EUR/month after tax; Benefits: Family allowances, pension, 30 days leave, private medical insurance

Skills & Requirements

Must-have

  • Ontology-aligned data model design
  • Advanced Python programming skills
  • Production-ready database management
  • Automated ETL workflow development
  • API implementation for LLM applications

Nice-to-have

  • Experience with bioimaging data handling
  • Knowledge graph and semantic web expertise
  • FAIR data practices familiarity
  • Containerization and orchestration experience
  • International stakeholder collaboration

Key Requirements

  • MSc or PhD in Data Science, Bioinformatics, or related field
  • Proven experience with Postgres or graph stores
  • Fluency in written and spoken English

Work Rights

Not specified

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